1. 介绍

Sequence Read Archive (SRA) data, available through multiple cloud providers and NCBI servers, is the largest publicly available repository of high throughput sequencing data. The archive accepts data from all branches of life as well as metagenomic and environmental surveys. SRA stores raw sequencing data and alignment information to enhance reproducibility and facilitate new discoveries through data analysis.

SRA（Sequence Read Archive，https://www.ncbi.nlm.nih.gov/sra）

高通量测序数据

2. 数据上传

知乎 | 诺禾致源 | 数据上传 | SRA数据上传操作指南

3. 数据下载

4. 数据处理

所下载的数据是处理后的，需要转化成fastq数据。

fastq转fasta

  1. seqkit fx2fa

参考

  1. https://www.ncbi.nlm.nih.gov/sra
  2. xuzhougeng | Fastq-dump: 一个神奇的软件
  3. xuzhougeng | 都8102年了，还用fastq-dump，快换fasterq-dump吧