ui

library(shiny)library(shinythemes)library(DT)ui <- navbarPage(title = "Survival Analysis",### select ###tabPanel("Survival Analysis",fluidPage(theme = shinytheme("cerulean"),h3(tags$b("@biotrainee"))),sidebarLayout(sidebarPanel(textInput("inputgene",h4(tags$b("Input Gene(s)")),placeholder = c("A1BG,A2BP1,ACTB,GAPDH")),helpText("Please input valid GENE SYMBOL(s) or IDENTIFIER(s), seped by COMMA."),br(),radioButtons("cdsvsoth",h4(tags$b("Select Gene Type")),c("CDS"="cds","Other"="other")),br(),radioButtons("mulvsuni",h4(tags$b("Select a Method")),c("Multi-gene Analysis"="mul","Uni-gene Analysis"="uni")),helpText("Multi: overall survival analysis; Uni: analysis gene by gene."),br(),selectInput("cancertype",h4(tags$b("Select Cancer Type")),c("Acute Myeloid Leukemia(LAML)"= "LAML","Adrenocortical Cancer(ACC)"="ACC","Bile Duct Cancer(CHOL)"="CHOL","Bladder Cancer(BLCA)"="BLCA","Breast Cancer(BRCA)"="BRCA","Cervical Cancer(CESC)"="CESC","Colon Cancer(COAD)"="COAD","Endometrioid Cancer(UCEC)"="UCEC","Esophageal Cancer(ESCA)"="ESCA","Glioblastoma(GBM)"="GBM","Head and Neck Cancer(HNSC)"="HNSC","Kidney Chromophobe(KICH)"="KICH","Kidney Clear Cell Carcinoma(KIRC)"="KIRC","Kidney Papillary Cell Carcinoma(KIRP)"="KIRP","Large B-cell Lymphoma(DLBC)"="DLBC","Liver Cancer(LIHC)"="LIHC","Lower Grade Glioma(LGG)"="LGG","Lung Adenocarcinoma(LUAD)"="LUAD","Lung Squamous Cell Carcinoma(LUSC)"="LUSC","Melanoma(SKCM)"="SKCM","Mesothelioma(MESO)"="MESO","Ocular melanomas(UVM)"="UVM","Ovarian Cancer(OV)"="OV","Pancreatic Cancer(PAAD)"="PAAD","Pheochromocytoma & Paraganglioma(PCPG)"="PCPG","Prostate Cancer(PRAD)"="PRAD","Rectal Cancer(READ)"="READ","Sarcoma(SARC)"="SARC","Stomach Cancer(STAD)"="STAD","Testicular Cancer(TGCT)"="TGCT","Thymoma(THYM)"="THYM","Thyroid Cancer(THCA)"="THCA","Uterine Carcinosarcoma(UCS)"="UCS"),selected = "BRCA"),helpText("Data Scource: GDC Hub"),br(),selectInput("groupby",h4(tags$b("Bifurcate At")),c("Median","Mean"),"Median"),br(),actionButton("plot","PLOT!",icon = icon("hand-spock"))),###mainpanelmainPanel(renderPlot("kmplot")))))
server
server的代码已经被我搞乱了…..打通一环又破坏了另一环…
主要是卡在load Rdata这个过程存在两个reactivevalue, 在“只有一种选项可成功”——
和
Error in .getReactiveEnvironment()$currentContext: Operation not allowed without an active reactive context. (You tried to do something that can only be done from inside a reactive expression or observer.)
中徘徊,感觉需要换一种思路重来….
