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Fastp

Location: Github

Install

  1. ## get source (you can also use browser to download from master or releases)
  2. git clone https://github.com/OpenGene/fastp.git
  3. ## build
  4. cd fastp
  5. make
  6. ## Install
  7. sudo make install

Usage

  1. fastp -i in.fq -o out.fq
  2. ## for paired end data (gzip compressed)
  3. fastp -i in.R1.fq.gz -I in.R2.fq.gz -o out.R1.fq.gz -O out.R2.fq.gz

Enjoy~

本文由Python腳本GitHub/語雀自動更新

由於語法渲染問題而影響閱讀體驗, 請移步博客閱讀~
本文GitPage地址

GitHub: Karobben
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