换安装源

Conda 使用北外源

conda config --set show_channel_urls yes

channels:
  - defaults
show_channel_urls: true
default_channels:
  - https://mirrors.bfsu.edu.cn/anaconda/pkgs/main
  - https://mirrors.bfsu.edu.cn/anaconda/pkgs/r
  - https://mirrors.bfsu.edu.cn/anaconda/pkgs/msys2
custom_channels:
  conda-forge: https://mirrors.bfsu.edu.cn/anaconda/cloud
  msys2: https://mirrors.bfsu.edu.cn/anaconda/cloud
  bioconda: https://mirrors.bfsu.edu.cn/anaconda/cloud
  menpo: https://mirrors.bfsu.edu.cn/anaconda/cloud
  pytorch: https://mirrors.bfsu.edu.cn/anaconda/cloud
  simpleitk: https://mirrors.bfsu.edu.cn/anaconda/cloud

pip 使用北外源

pip install pip -U --user
pip config set global.index-url https://mirrors.bfsu.edu.cn/pypi/web/simple

深度学习相关

Tensorflow

For CUDA 10.0

pip install tensorflow-gpu==1.13.1
pip install keras==2.2.4

CARE

pip install csbdeep
cupy
For CUDA 10.0
pip install cupy-cuda100

图像处理相关

skimage

pip install scikit-image
conda install -c conda-forge scikit-image

SimpleITK

pip install SimpleITK
conda install -c simpleitk simpleitk

OpenCV

pip install opencv-python
conda install -c conda-forge opencv
opencv-python

读写文件

pyklb

pip install git+https://github.com/bhoeckendorf/pyklb.git@skbuild

tifffile

pip install tifffile

图像可视化

napari

pip install "napari[all]"
pip install "napari[pyqt5]" # for PyQt5
pip install "napari[pyside2]" # for PySide2